Genome-Wide Identification of Metal Tolerance Protein Genes in Populus trichocarpa and Their Roles in Response to Various Heavy Metal Stresses.
Identifieur interne : 000374 ( Main/Exploration ); précédent : 000373; suivant : 000375Genome-Wide Identification of Metal Tolerance Protein Genes in Populus trichocarpa and Their Roles in Response to Various Heavy Metal Stresses.
Auteurs : Yongfeng Gao [République populaire de Chine] ; Fengming Yang [République populaire de Chine] ; Jikai Liu [République populaire de Chine] ; Wang Xie [République populaire de Chine] ; Lin Zhang [République populaire de Chine] ; Zihao Chen [République populaire de Chine] ; Zhuoxi Peng [République populaire de Chine] ; Yongbin Ou [République populaire de Chine] ; Yinan Yao [République populaire de Chine]Source :
- International journal of molecular sciences [ 1422-0067 ] ; 2020.
Abstract
Metal tolerance proteins (MTPs) are plant divalent cation transporters that play important roles in plant metal tolerance and homeostasis. Poplar is an ideal candidate for the phytoremediation of heavy metals because of its numerous beneficial attributes. However, the definitive phylogeny and heavy metal transport mechanisms of the MTP family in poplar remain unknown. Here, 22 MTP genes in P. trichocarpa were identified and classified into three major clusters and seven groups according to phylogenetic relationships. An evolutionary analysis suggested that PtrMTP genes had undergone gene expansion through tandem or segmental duplication events. Moreover, all PtrMTPs were predicted to localize in the vacuole and/or cell membrane, and contained typical structural features of the MTP family, cation efflux domain. The temporal and spatial expression pattern analysis results indicated the involvement of PtrMTP genes in poplar developmental control. Under heavy metal stress, most of PtrMTP genes were induced by at least two metal ions in roots, stems or leaves. In addition, PtrMTP8.1, PtrMTP9 and PtrMTP10.4 displayed the ability of Mn transport in yeast cells, and PtrMTP6 could transport Co, Fe and Mn. These findings will provide an important foundation to elucidate the biological functions of PtrMTP genes, and especially their role in regulating heavy metal tolerance in poplar.
DOI: 10.3390/ijms21051680
PubMed: 32121430
PubMed Central: PMC7084629
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Tolerance Protein Genes in <i>Populus trichocarpa</i> and Their Roles in Response to Various Heavy Metal Stresses.</title><author><name sortKey="Gao, Yongfeng" sort="Gao, Yongfeng" uniqKey="Gao Y" first="Yongfeng" last="Gao">Yongfeng Gao</name><affiliation wicri:level="1"><nlm:affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010</wicri:regionArea><wicri:noRegion>Mianyang 621010</wicri:noRegion></affiliation></author><author><name sortKey="Yang, Fengming" sort="Yang, Fengming" uniqKey="Yang F" first="Fengming" last="Yang">Fengming Yang</name><affiliation wicri:level="1"><nlm:affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010</wicri:regionArea><wicri:noRegion>Mianyang 621010</wicri:noRegion></affiliation></author><author><name sortKey="Liu, Jikai" sort="Liu, Jikai" uniqKey="Liu J" first="Jikai" last="Liu">Jikai Liu</name><affiliation wicri:level="1"><nlm:affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010</wicri:regionArea><wicri:noRegion>Mianyang 621010</wicri:noRegion></affiliation></author><author><name sortKey="Xie, Wang" sort="Xie, Wang" uniqKey="Xie W" first="Wang" last="Xie">Wang Xie</name><affiliation wicri:level="1"><nlm:affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010</wicri:regionArea><wicri:noRegion>Mianyang 621010</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Lin" sort="Zhang, Lin" uniqKey="Zhang L" first="Lin" last="Zhang">Lin Zhang</name><affiliation wicri:level="1"><nlm:affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010</wicri:regionArea><wicri:noRegion>Mianyang 621010</wicri:noRegion></affiliation></author><author><name sortKey="Chen, Zihao" sort="Chen, Zihao" uniqKey="Chen Z" first="Zihao" last="Chen">Zihao Chen</name><affiliation wicri:level="1"><nlm:affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010</wicri:regionArea><wicri:noRegion>Mianyang 621010</wicri:noRegion></affiliation></author><author><name sortKey="Peng, Zhuoxi" sort="Peng, Zhuoxi" uniqKey="Peng Z" first="Zhuoxi" last="Peng">Zhuoxi Peng</name><affiliation wicri:level="1"><nlm:affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010</wicri:regionArea><wicri:noRegion>Mianyang 621010</wicri:noRegion></affiliation></author><author><name sortKey="Ou, Yongbin" sort="Ou, Yongbin" uniqKey="Ou Y" first="Yongbin" last="Ou">Yongbin Ou</name><affiliation wicri:level="1"><nlm:affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010</wicri:regionArea><wicri:noRegion>Mianyang 621010</wicri:noRegion></affiliation></author><author><name sortKey="Yao, Yinan" sort="Yao, Yinan" uniqKey="Yao Y" first="Yinan" last="Yao">Yinan Yao</name><affiliation wicri:level="1"><nlm:affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010</wicri:regionArea><wicri:noRegion>Mianyang 621010</wicri:noRegion></affiliation></author></analytic><series><title level="j">International journal of molecular sciences</title><idno type="eISSN">1422-0067</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Metal tolerance proteins (MTPs) are plant divalent cation transporters that play important roles in plant metal tolerance and homeostasis. Poplar is an ideal candidate for the phytoremediation of heavy metals because of its numerous beneficial attributes. However, the definitive phylogeny and heavy metal transport mechanisms of the <i>MTP</i> family in poplar remain unknown. Here, 22 <i>MTP</i> genes in <i>P. trichocarpa</i> were identified and classified into three major clusters and seven groups according to phylogenetic relationships. An evolutionary analysis suggested that <i>PtrMTP</i> genes had undergone gene expansion through tandem or segmental duplication events. Moreover, all PtrMTPs were predicted to localize in the vacuole and/or cell membrane, and contained typical structural features of the MTP family, cation efflux domain. The temporal and spatial expression pattern analysis results indicated the involvement of <i>PtrMTP</i> genes in poplar developmental control. Under heavy metal stress, most of <i>PtrMTP</i> genes were induced by at least two metal ions in roots, stems or leaves. In addition, PtrMTP8.1, PtrMTP9 and PtrMTP10.4 displayed the ability of Mn transport in yeast cells, and PtrMTP6 could transport Co, Fe and Mn. These findings will provide an important foundation to elucidate the biological functions of <i>PtrMTP</i> genes, and especially their role in regulating heavy metal tolerance in poplar.</div></front></TEI><pubmed><MedlineCitation Status="In-Process" Owner="NLM"><PMID Version="1">32121430</PMID><DateRevised><Year>2020</Year><Month>03</Month><Day>25</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1422-0067</ISSN><JournalIssue CitedMedium="Internet"><Volume>21</Volume><Issue>5</Issue><PubDate><Year>2020</Year><Month>Feb</Month><Day>29</Day></PubDate></JournalIssue><Title>International journal of molecular sciences</Title><ISOAbbreviation>Int J Mol Sci</ISOAbbreviation></Journal><ArticleTitle>Genome-Wide Identification of Metal Tolerance Protein Genes in <i>Populus trichocarpa</i> and Their Roles in Response to Various Heavy Metal Stresses.</ArticleTitle><ELocationID EIdType="pii" ValidYN="Y">E1680</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.3390/ijms21051680</ELocationID><Abstract><AbstractText>Metal tolerance proteins (MTPs) are plant divalent cation transporters that play important roles in plant metal tolerance and homeostasis. Poplar is an ideal candidate for the phytoremediation of heavy metals because of its numerous beneficial attributes. However, the definitive phylogeny and heavy metal transport mechanisms of the <i>MTP</i> family in poplar remain unknown. Here, 22 <i>MTP</i> genes in <i>P. trichocarpa</i> were identified and classified into three major clusters and seven groups according to phylogenetic relationships. An evolutionary analysis suggested that <i>PtrMTP</i> genes had undergone gene expansion through tandem or segmental duplication events. Moreover, all PtrMTPs were predicted to localize in the vacuole and/or cell membrane, and contained typical structural features of the MTP family, cation efflux domain. The temporal and spatial expression pattern analysis results indicated the involvement of <i>PtrMTP</i> genes in poplar developmental control. Under heavy metal stress, most of <i>PtrMTP</i> genes were induced by at least two metal ions in roots, stems or leaves. In addition, PtrMTP8.1, PtrMTP9 and PtrMTP10.4 displayed the ability of Mn transport in yeast cells, and PtrMTP6 could transport Co, Fe and Mn. These findings will provide an important foundation to elucidate the biological functions of <i>PtrMTP</i> genes, and especially their role in regulating heavy metal tolerance in poplar.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Gao</LastName><ForeName>Yongfeng</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yang</LastName><ForeName>Fengming</ForeName><Initials>F</Initials><AffiliationInfo><Affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Liu</LastName><ForeName>Jikai</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Xie</LastName><ForeName>Wang</ForeName><Initials>W</Initials><AffiliationInfo><Affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Lin</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Chen</LastName><ForeName>Zihao</ForeName><Initials>Z</Initials><AffiliationInfo><Affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Peng</LastName><ForeName>Zhuoxi</ForeName><Initials>Z</Initials><AffiliationInfo><Affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ou</LastName><ForeName>Yongbin</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yao</LastName><ForeName>Yinan</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><GrantID>81703656</GrantID><Agency>National Natural Science Foundation of China</Agency><Country></Country></Grant><Grant><GrantID>2017HM0076</GrantID><Agency>Sichuan Province Science and Technology Support Program</Agency><Country></Country></Grant><Grant><GrantID>17ZB0456</GrantID><Agency>Education Department of Sichuan Province</Agency><Country></Country></Grant><Grant><GrantID>14zx7157, 18LZX626, LSZ326</GrantID><Agency>Southwest University of Science and Technology</Agency><Country></Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>02</Month><Day>29</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Int J Mol Sci</MedlineTA><NlmUniqueID>101092791</NlmUniqueID><ISSNLinking>1422-0067</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Populus trichocarpa</Keyword><Keyword 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sortKey="Chen, Zihao" sort="Chen, Zihao" uniqKey="Chen Z" first="Zihao" last="Chen">Zihao Chen</name><name sortKey="Liu, Jikai" sort="Liu, Jikai" uniqKey="Liu J" first="Jikai" last="Liu">Jikai Liu</name><name sortKey="Ou, Yongbin" sort="Ou, Yongbin" uniqKey="Ou Y" first="Yongbin" last="Ou">Yongbin Ou</name><name sortKey="Peng, Zhuoxi" sort="Peng, Zhuoxi" uniqKey="Peng Z" first="Zhuoxi" last="Peng">Zhuoxi Peng</name><name sortKey="Xie, Wang" sort="Xie, Wang" uniqKey="Xie W" first="Wang" last="Xie">Wang Xie</name><name sortKey="Yang, Fengming" sort="Yang, Fengming" uniqKey="Yang F" first="Fengming" last="Yang">Fengming Yang</name><name sortKey="Yao, Yinan" sort="Yao, Yinan" uniqKey="Yao Y" first="Yinan" last="Yao">Yinan Yao</name><name sortKey="Zhang, Lin" sort="Zhang, Lin" uniqKey="Zhang L" first="Lin" last="Zhang">Lin Zhang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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